Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 SLC25A6P5-201ENST00000435663 894 ntBASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 AC104692.2-201ENST00000603054 253 ntBASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 AL773604.1-201ENST00000617417 272 ntBASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 AL596257.1-201ENST00000641463 2694 ntBASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP1BQ7LBR1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 KRT18P67-201ENST00000432816 1264 ntBASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 FDX1P1-201ENST00000449115 551 ntBASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 FGFR3P6-201ENST00000457012 610 ntBASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AC009078.2-202ENST00000463353 338 ntBASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AL139288.1-201ENST00000623748 933 ntBASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP1BQ7LBR1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 AL513477.1-201ENST00000602865 2407 ntBASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 AL645608.8-201ENST00000606034 2086 ntBASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP1BQ7LBR1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms