Protein–RNA interactions for Protein: Q76G19

PDZD4, PDZ domain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4Q76G19 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.11■□□□□ 0.49
PDZD4Q76G19 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDZD4Q76G19 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDZD4Q76G19 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 CNN2P11-201ENST00000429351 262 ntBASIC18.1■□□□□ 0.49
PDZD4Q76G19 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 AC023141.13-201ENST00000604991 943 ntBASIC18.1■□□□□ 0.49
PDZD4Q76G19 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDZD4Q76G19 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDZD4Q76G19 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 AC025580.3-201ENST00000617932 1424 ntBASIC18.09■□□□□ 0.49
PDZD4Q76G19 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 RHOQP3-201ENST00000437982 621 ntBASIC18.09■□□□□ 0.49
PDZD4Q76G19 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDZD4Q76G19 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDZD4Q76G19 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDZD4Q76G19 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
PDZD4Q76G19 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.08■□□□□ 0.49
PDZD4Q76G19 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDZD4Q76G19 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDZD4Q76G19 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.08■□□□□ 0.49
PDZD4Q76G19 LYSMD4-203ENST00000378904 2122 ntBASIC18.08■□□□□ 0.49
PDZD4Q76G19 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDZD4Q76G19 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.08■□□□□ 0.49
PDZD4Q76G19 AL590787.1-201ENST00000568856 1315 ntBASIC18.08■□□□□ 0.49
PDZD4Q76G19 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 AC046185.3-201ENST00000623228 1824 ntBASIC18.08■□□□□ 0.48
PDZD4Q76G19 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 AC074386.1-202ENST00000463561 864 ntBASIC18.08■□□□□ 0.48
PDZD4Q76G19 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.08■□□□□ 0.48
PDZD4Q76G19 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDZD4Q76G19 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms