Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AL139424.1-201ENST00000607572 797 ntBASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AC092364.2-201ENST00000596710 2692 ntBASIC19.21■□□□□ 0.67
SHC4Q6S5L8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 AL021920.2-201ENST00000624828 1351 ntBASIC19.2■□□□□ 0.66
SHC4Q6S5L8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC4Q6S5L8 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.19■□□□□ 0.66
SHC4Q6S5L8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 AKR1C7P-201ENST00000305623 895 ntBASIC19.19■□□□□ 0.66
SHC4Q6S5L8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 AL589182.2-201ENST00000619332 1049 ntBASIC19.19■□□□□ 0.66
SHC4Q6S5L8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.19■□□□□ 0.66
SHC4Q6S5L8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 PAWRP1-201ENST00000451083 565 ntBASIC19.18■□□□□ 0.66
SHC4Q6S5L8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC4Q6S5L8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms