Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.92■□□□□ 0.46
RNF43Q68DV7 AC006557.2-201ENST00000592985 1240 ntBASIC17.92■□□□□ 0.46
RNF43Q68DV7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 LINC01451-201ENST00000623792 534 ntBASIC17.92■□□□□ 0.46
RNF43Q68DV7 AC134684.3-201ENST00000641758 218 ntBASIC17.92■□□□□ 0.46
RNF43Q68DV7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 AC105020.1-201ENST00000435356 2205 ntBASIC17.92■□□□□ 0.46
RNF43Q68DV7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 AP002414.3-201ENST00000589352 1468 ntBASIC17.91■□□□□ 0.46
RNF43Q68DV7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 STK19B-204ENST00000512515 211 ntBASIC17.91■□□□□ 0.46
RNF43Q68DV7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 Z83851.2-201ENST00000609564 659 ntBASIC17.91■□□□□ 0.46
RNF43Q68DV7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF43Q68DV7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF43Q68DV7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 LINC00304-203ENST00000565008 1864 ntBASIC17.9■□□□□ 0.46
RNF43Q68DV7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 AC133963.1-201ENST00000504166 1679 ntBASIC17.9■□□□□ 0.46
RNF43Q68DV7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 AC011270.2-201ENST00000624293 2550 ntBASIC17.9■□□□□ 0.46
RNF43Q68DV7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF43Q68DV7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF43Q68DV7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms