Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 AC004233.3-201ENST00000607794 1269 ntBASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CDC42BPAQ5VT25 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 LITAF-210ENST00000571976 548 ntTSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 LITAF-214ENST00000574703 486 ntTSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 AC013467.2-201ENST00000605472 835 ntBASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 MTND6P24-201ENST00000440466 518 ntBASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC25.4■■□□□ 1.66
CDC42BPAQ5VT25 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CDC42BPAQ5VT25 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 WDR53-204ENST00000433160 887 ntTSL 5 BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 AC027307.3-201ENST00000594262 1100 ntBASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 NOC2LP1-202ENST00000452600 2235 ntBASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CDC42BPAQ5VT25 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 AC087499.5-201ENST00000452760 1342 ntBASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 GATB-213ENST00000515812 1893 ntTSL 5 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC25.38■■□□□ 1.65
CDC42BPAQ5VT25 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 AC079776.1-201ENST00000401540 1152 ntBASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 QPRT-203ENST00000562473 579 ntTSL 3 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 RN7SL828P-201ENST00000607615 303 ntBASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 AL035456.1-201ENST00000456064 1369 ntBASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 AL671710.1-201ENST00000610245 2349 ntBASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 NME2P1-201ENST00000426182 414 ntBASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CDC42BPAQ5VT25 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms