Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 AC091167.2-201ENST00000579581 588 ntBASIC16.35■□□□□ 0.21
RIF1Q5UIP0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.35■□□□□ 0.21
RIF1Q5UIP0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 KLF2P4-201ENST00000451959 1225 ntBASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AC123567.1-201ENST00000548294 1261 ntBASIC16.34■□□□□ 0.21
RIF1Q5UIP0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 REXO1L11P-201ENST00000620964 1927 ntBASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.34■□□□□ 0.21
RIF1Q5UIP0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIF1Q5UIP0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.33■□□□□ 0.21
RIF1Q5UIP0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIF1Q5UIP0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIF1Q5UIP0 AL353732.1-201ENST00000569618 1459 ntBASIC16.33■□□□□ 0.21
RIF1Q5UIP0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIF1Q5UIP0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RIF1Q5UIP0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 HINT2P1-201ENST00000419438 481 ntBASIC16.33■□□□□ 0.2
RIF1Q5UIP0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 SPDYE18-201ENST00000510091 1050 ntBASIC16.33■□□□□ 0.2
RIF1Q5UIP0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 RRP7BP-205ENST00000566851 833 ntBASIC16.33■□□□□ 0.2
RIF1Q5UIP0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 AL033527.5-202ENST00000641632 1098 ntBASIC16.33■□□□□ 0.2
RIF1Q5UIP0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.33■□□□□ 0.2
RIF1Q5UIP0 AC026740.1-201ENST00000607068 791 ntBASIC16.33■□□□□ 0.2
RIF1Q5UIP0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RIF1Q5UIP0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms