Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.51■□□□□ 0.39
ALFQ53S48 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
ALFQ53S48 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ALFQ53S48 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ALFQ53S48 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
ALFQ53S48 AC124947.2-201ENST00000547118 1133 ntBASIC17.51■□□□□ 0.39
ALFQ53S48 FAM197Y3-203ENST00000618346 717 ntBASIC17.51■□□□□ 0.39
ALFQ53S48 REXO1L3P-201ENST00000622202 1288 ntBASIC17.51■□□□□ 0.39
ALFQ53S48 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.51■□□□□ 0.39
ALFQ53S48 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.51■□□□□ 0.39
ALFQ53S48 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.51■□□□□ 0.39
ALFQ53S48 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALFQ53S48 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.5■□□□□ 0.39
ALFQ53S48 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.5■□□□□ 0.39
ALFQ53S48 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.5■□□□□ 0.39
ALFQ53S48 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.5■□□□□ 0.39
ALFQ53S48 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.5■□□□□ 0.39
ALFQ53S48 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
ALFQ53S48 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ALFQ53S48 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.5■□□□□ 0.39
ALFQ53S48 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ALFQ53S48 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.5■□□□□ 0.39
ALFQ53S48 AC107918.2-201ENST00000530817 355 ntBASIC17.5■□□□□ 0.39
ALFQ53S48 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.5■□□□□ 0.39
ALFQ53S48 AC018845.2-201ENST00000568326 409 ntBASIC17.5■□□□□ 0.39
ALFQ53S48 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ALFQ53S48 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.5■□□□□ 0.39
ALFQ53S48 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.5■□□□□ 0.39
ALFQ53S48 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALFQ53S48 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.5■□□□□ 0.39
ALFQ53S48 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.49■□□□□ 0.39
ALFQ53S48 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 AC080080.1-201ENST00000625121 2420 ntBASIC17.49■□□□□ 0.39
ALFQ53S48 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
ALFQ53S48 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ALFQ53S48 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
ALFQ53S48 AL591424.1-201ENST00000442569 1213 ntBASIC17.49■□□□□ 0.39
ALFQ53S48 PGAM5P1-201ENST00000518923 814 ntBASIC17.49■□□□□ 0.39
ALFQ53S48 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.49■□□□□ 0.39
ALFQ53S48 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 AC010507.1-201ENST00000633895 436 ntBASIC17.49■□□□□ 0.39
ALFQ53S48 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.49■□□□□ 0.39
ALFQ53S48 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.49■□□□□ 0.39
ALFQ53S48 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.49■□□□□ 0.39
ALFQ53S48 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
ALFQ53S48 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALFQ53S48 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms