Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 DUX4L17-201ENST00000557360 1267 ntBASIC20.84■□□□□ 0.93
ATP2B3Q16720 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 AC091812.2-201ENST00000619081 385 ntBASIC20.84■□□□□ 0.93
ATP2B3Q16720 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2B3Q16720 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2B3Q16720 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2B3Q16720 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 AP001160.2-201ENST00000596071 487 ntBASIC20.83■□□□□ 0.93
ATP2B3Q16720 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ATP2B3Q16720 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP2B3Q16720 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B3Q16720 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B3Q16720 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP2B3Q16720 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B3Q16720 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B3Q16720 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2B3Q16720 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 ELL2P1-201ENST00000413990 1906 ntBASIC20.82■□□□□ 0.92
ATP2B3Q16720 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 AP002472.1-201ENST00000577490 586 ntBASIC20.82■□□□□ 0.92
ATP2B3Q16720 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 AC084018.2-201ENST00000613093 2607 ntBASIC20.82■□□□□ 0.92
ATP2B3Q16720 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP2B3Q16720 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2B3Q16720 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 LINC02012-201ENST00000608206 1725 ntBASIC20.81■□□□□ 0.92
ATP2B3Q16720 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2B3Q16720 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
ATP2B3Q16720 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms