Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.78■□□□□ 0.76
SSRP1Q08945 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.78■□□□□ 0.76
SSRP1Q08945 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SSRP1Q08945 AC105339.3-201ENST00000560043 636 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 AC012640.2-201ENST00000561606 901 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SSRP1Q08945 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SSRP1Q08945 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SSRP1Q08945 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
SSRP1Q08945 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SSRP1Q08945 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SSRP1Q08945 AL021920.2-201ENST00000624828 1351 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.78■□□□□ 0.76
SSRP1Q08945 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.78■□□□□ 0.76
SSRP1Q08945 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SSRP1Q08945 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
SSRP1Q08945 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 AC011676.5-201ENST00000624864 2660 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
SSRP1Q08945 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.77■□□□□ 0.76
SSRP1Q08945 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
SSRP1Q08945 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.77■□□□□ 0.76
SSRP1Q08945 PCDHB17P-201ENST00000539533 2393 ntBASIC19.77■□□□□ 0.76
SSRP1Q08945 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.77■□□□□ 0.76
SSRP1Q08945 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.77■□□□□ 0.76
SSRP1Q08945 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.77■□□□□ 0.76
SSRP1Q08945 RPS15P9-201ENST00000494093 319 ntBASIC19.77■□□□□ 0.76
SSRP1Q08945 AC136632.2-201ENST00000512891 861 ntBASIC19.77■□□□□ 0.76
SSRP1Q08945 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.77■□□□□ 0.76
SSRP1Q08945 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.77■□□□□ 0.76
SSRP1Q08945 AL773604.1-201ENST00000617417 272 ntBASIC19.77■□□□□ 0.76
SSRP1Q08945 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SSRP1Q08945 FAM215A-202ENST00000632077 792 ntBASIC19.77■□□□□ 0.76
SSRP1Q08945 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.77■□□□□ 0.76
SSRP1Q08945 AF228730.7-201ENST00000641842 219 ntBASIC19.77■□□□□ 0.76
SSRP1Q08945 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.77■□□□□ 0.76
SSRP1Q08945 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSRP1Q08945 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SSRP1Q08945 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSRP1Q08945 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSRP1Q08945 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SSRP1Q08945 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SSRP1Q08945 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.77■□□□□ 0.75
SSRP1Q08945 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SSRP1Q08945 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSRP1Q08945 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SSRP1Q08945 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.76■□□□□ 0.75
SSRP1Q08945 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 AP002414.3-201ENST00000589352 1468 ntBASIC19.76■□□□□ 0.75
SSRP1Q08945 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.76■□□□□ 0.75
SSRP1Q08945 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SSRP1Q08945 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 MIR1199-201ENST00000621445 119 ntBASIC19.76■□□□□ 0.75
SSRP1Q08945 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.76■□□□□ 0.75
SSRP1Q08945 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.76■□□□□ 0.75
SSRP1Q08945 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.76■□□□□ 0.75
SSRP1Q08945 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.76■□□□□ 0.75
SSRP1Q08945 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSRP1Q08945 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSRP1Q08945 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.75■□□□□ 0.75
SSRP1Q08945 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSRP1Q08945 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.75■□□□□ 0.75
SSRP1Q08945 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.75■□□□□ 0.75
SSRP1Q08945 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.75■□□□□ 0.75
SSRP1Q08945 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.75■□□□□ 0.75
SSRP1Q08945 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.75■□□□□ 0.75
SSRP1Q08945 AL356488.2-201ENST00000602755 427 ntBASIC19.75■□□□□ 0.75
SSRP1Q08945 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.75■□□□□ 0.75
SSRP1Q08945 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms