Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.18■□□□□ 0.18
GABREP78334 AC026150.2-201ENST00000564693 1156 ntBASIC16.18■□□□□ 0.18
GABREP78334 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
GABREP78334 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.18■□□□□ 0.18
GABREP78334 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.18■□□□□ 0.18
GABREP78334 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.18■□□□□ 0.18
GABREP78334 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GABREP78334 AC008677.1-201ENST00000519230 1561 ntBASIC16.17■□□□□ 0.18
GABREP78334 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GABREP78334 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GABREP78334 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.17■□□□□ 0.18
GABREP78334 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.17■□□□□ 0.18
GABREP78334 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.17■□□□□ 0.18
GABREP78334 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.17■□□□□ 0.18
GABREP78334 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.17■□□□□ 0.18
GABREP78334 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GABREP78334 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
GABREP78334 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GABREP78334 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GABREP78334 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GABREP78334 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.16■□□□□ 0.18
GABREP78334 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 SPDYE14P-201ENST00000442619 822 ntBASIC16.16■□□□□ 0.18
GABREP78334 GAPDHP21-201ENST00000450301 1010 ntBASIC16.16■□□□□ 0.18
GABREP78334 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 KRT8P23-201ENST00000560090 1207 ntBASIC16.16■□□□□ 0.18
GABREP78334 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 MIR6080-201ENST00000617359 66 ntBASIC16.16■□□□□ 0.18
GABREP78334 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.16■□□□□ 0.18
GABREP78334 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GABREP78334 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABREP78334 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GABREP78334 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.15■□□□□ 0.18
GABREP78334 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 KRT18P55-202ENST00000578578 1546 ntBASIC16.15■□□□□ 0.18
GABREP78334 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABREP78334 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms