Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP46P62068 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP46P62068 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.92■□□□□ 0.46
USP46P62068 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
USP46P62068 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
USP46P62068 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 HTR7P1-202ENST00000624664 4411 ntBASIC17.91■□□□□ 0.46
USP46P62068 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.91■□□□□ 0.46
USP46P62068 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.91■□□□□ 0.46
USP46P62068 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
USP46P62068 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.91■□□□□ 0.46
USP46P62068 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.91■□□□□ 0.46
USP46P62068 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
USP46P62068 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.91■□□□□ 0.46
USP46P62068 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.91■□□□□ 0.46
USP46P62068 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.91■□□□□ 0.46
USP46P62068 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.91■□□□□ 0.46
USP46P62068 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.91■□□□□ 0.46
USP46P62068 AL078644.1-201ENST00000609881 752 ntBASIC17.91■□□□□ 0.46
USP46P62068 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.91■□□□□ 0.46
USP46P62068 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.91■□□□□ 0.46
USP46P62068 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.91■□□□□ 0.46
USP46P62068 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.91■□□□□ 0.46
USP46P62068 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
USP46P62068 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP46P62068 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
USP46P62068 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.9■□□□□ 0.46
USP46P62068 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.9■□□□□ 0.46
USP46P62068 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP46P62068 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.9■□□□□ 0.46
USP46P62068 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
USP46P62068 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.9■□□□□ 0.46
USP46P62068 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.9■□□□□ 0.46
USP46P62068 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.9■□□□□ 0.46
USP46P62068 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.9■□□□□ 0.46
USP46P62068 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.9■□□□□ 0.46
USP46P62068 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
USP46P62068 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.9■□□□□ 0.46
USP46P62068 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
USP46P62068 AC023141.13-201ENST00000604991 943 ntBASIC17.9■□□□□ 0.46
USP46P62068 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.9■□□□□ 0.46
USP46P62068 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.9■□□□□ 0.46
USP46P62068 AC134684.3-201ENST00000641758 218 ntBASIC17.9■□□□□ 0.46
USP46P62068 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
USP46P62068 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP46P62068 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP46P62068 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP46P62068 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.89■□□□□ 0.46
USP46P62068 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP46P62068 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP46P62068 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP46P62068 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms