Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
AP1S1P61966 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.13■□□□□ 0.33
AP1S1P61966 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 ACTL9-202ENST00000612068 1252 ntBASIC17.13■□□□□ 0.33
AP1S1P61966 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.13■□□□□ 0.33
AP1S1P61966 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
AP1S1P61966 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 AC092068.3-201ENST00000587894 2016 ntBASIC17.13■□□□□ 0.33
AP1S1P61966 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.12■□□□□ 0.33
AP1S1P61966 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 RHOQP3-201ENST00000437982 621 ntBASIC17.12■□□□□ 0.33
AP1S1P61966 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.12■□□□□ 0.33
AP1S1P61966 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.12■□□□□ 0.33
AP1S1P61966 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 AL671883.3-201ENST00000603274 991 ntBASIC17.12■□□□□ 0.33
AP1S1P61966 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
AP1S1P61966 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
AP1S1P61966 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 AL353732.1-201ENST00000569618 1459 ntBASIC17.12■□□□□ 0.33
AP1S1P61966 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP1S1P61966 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.11■□□□□ 0.33
AP1S1P61966 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 AL121761.2-201ENST00000598007 1648 ntBASIC17.11■□□□□ 0.33
AP1S1P61966 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S1P61966 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S1P61966 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
AP1S1P61966 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.11■□□□□ 0.33
AP1S1P61966 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 AP002490.2-201ENST00000524791 560 ntBASIC17.11■□□□□ 0.33
AP1S1P61966 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S1P61966 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.11■□□□□ 0.33
AP1S1P61966 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.11■□□□□ 0.33
AP1S1P61966 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S1P61966 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AP1S1P61966 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms