Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC010654.1-201ENST00000615722 808 ntBASIC16.33■□□□□ 0.2
VSX2P58304 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.33■□□□□ 0.2
VSX2P58304 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.33■□□□□ 0.2
VSX2P58304 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VSX2P58304 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VSX2P58304 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VSX2P58304 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
VSX2P58304 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.32■□□□□ 0.2
VSX2P58304 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.32■□□□□ 0.2
VSX2P58304 PAWRP1-201ENST00000451083 565 ntBASIC16.32■□□□□ 0.2
VSX2P58304 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
VSX2P58304 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.32■□□□□ 0.2
VSX2P58304 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.32■□□□□ 0.2
VSX2P58304 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.32■□□□□ 0.2
VSX2P58304 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VSX2P58304 AL023806.1-201ENST00000603994 1649 ntBASIC16.32■□□□□ 0.2
VSX2P58304 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
VSX2P58304 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSX2P58304 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 PMS2P7-201ENST00000506558 1336 ntBASIC16.31■□□□□ 0.2
VSX2P58304 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 AC087163.2-201ENST00000457299 853 ntBASIC16.31■□□□□ 0.2
VSX2P58304 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.31■□□□□ 0.2
VSX2P58304 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VSX2P58304 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 AC124067.4-201ENST00000519691 2379 ntBASIC16.31■□□□□ 0.2
VSX2P58304 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
VSX2P58304 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
VSX2P58304 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSX2P58304 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.3■□□□□ 0.2
VSX2P58304 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VSX2P58304 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VSX2P58304 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.3■□□□□ 0.2
VSX2P58304 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.3■□□□□ 0.2
VSX2P58304 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VSX2P58304 OR7E47P-204ENST00000575924 449 ntBASIC16.3■□□□□ 0.2
VSX2P58304 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.3■□□□□ 0.2
VSX2P58304 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSX2P58304 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms