Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN2P57739 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN2P57739 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN2P57739 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN2P57739 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN2P57739 AL355306.1-201ENST00000415580 579 ntBASIC16.78■□□□□ 0.28
CLDN2P57739 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 CYMP-203ENST00000474680 1263 ntBASIC16.78■□□□□ 0.28
CLDN2P57739 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN2P57739 AC005412.3-201ENST00000580309 715 ntBASIC16.78■□□□□ 0.28
CLDN2P57739 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN2P57739 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN2P57739 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN2P57739 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLDN2P57739 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDN2P57739 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN2P57739 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN2P57739 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN2P57739 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 AC012569.1-201ENST00000591191 1524 ntBASIC16.77■□□□□ 0.28
CLDN2P57739 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.77■□□□□ 0.28
CLDN2P57739 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN2P57739 KRT8P48-201ENST00000515599 1220 ntBASIC16.77■□□□□ 0.28
CLDN2P57739 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN2P57739 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN2P57739 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN2P57739 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN2P57739 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN2P57739 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLDN2P57739 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN2P57739 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN2P57739 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN2P57739 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN2P57739 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN2P57739 AL138688.1-201ENST00000624851 1594 ntBASIC16.77■□□□□ 0.27
CLDN2P57739 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.77■□□□□ 0.27
CLDN2P57739 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLDN2P57739 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN2P57739 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN2P57739 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN2P57739 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN2P57739 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN2P57739 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN2P57739 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 AC004449.1-201ENST00000564240 433 ntBASIC16.76■□□□□ 0.27
CLDN2P57739 AC026120.1-201ENST00000611536 926 ntBASIC16.76■□□□□ 0.27
CLDN2P57739 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN2P57739 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN2P57739 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN2P57739 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN2P57739 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms