Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.92□□□□□ -0.02
FOXG1P55316 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
FOXG1P55316 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
FOXG1P55316 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
FOXG1P55316 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.92□□□□□ -0.02
FOXG1P55316 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FOXG1P55316 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
FOXG1P55316 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.92□□□□□ -0.02
FOXG1P55316 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.92□□□□□ -0.02
FOXG1P55316 BCAR1-209ENST00000546196 1340 ntBASIC14.92□□□□□ -0.02
FOXG1P55316 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 LTB4R2-202ENST00000528054 3092 ntBASIC14.91□□□□□ -0.02
FOXG1P55316 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXG1P55316 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXG1P55316 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXG1P55316 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.91□□□□□ -0.02
FOXG1P55316 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
FOXG1P55316 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.91□□□□□ -0.02
FOXG1P55316 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.91□□□□□ -0.02
FOXG1P55316 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.91□□□□□ -0.02
FOXG1P55316 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.91□□□□□ -0.02
FOXG1P55316 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.91□□□□□ -0.02
FOXG1P55316 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXG1P55316 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.91□□□□□ -0.02
FOXG1P55316 AC124947.2-201ENST00000547118 1133 ntBASIC14.91□□□□□ -0.02
FOXG1P55316 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.91□□□□□ -0.02
FOXG1P55316 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.91□□□□□ -0.02
FOXG1P55316 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.91□□□□□ -0.02
FOXG1P55316 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.91□□□□□ -0.02
FOXG1P55316 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.91□□□□□ -0.02
FOXG1P55316 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 AC025580.3-201ENST00000617932 1424 ntBASIC14.91□□□□□ -0.02
FOXG1P55316 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
FOXG1P55316 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FOXG1P55316 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FOXG1P55316 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 PCDHB17P-201ENST00000539533 2393 ntBASIC14.9□□□□□ -0.02
FOXG1P55316 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXG1P55316 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXG1P55316 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.9□□□□□ -0.02
FOXG1P55316 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.9□□□□□ -0.02
FOXG1P55316 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXG1P55316 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.9□□□□□ -0.02
FOXG1P55316 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
FOXG1P55316 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.9□□□□□ -0.02
FOXG1P55316 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.9□□□□□ -0.02
FOXG1P55316 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FOXG1P55316 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
FOXG1P55316 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 AC129492.6-201ENST00000611383 1305 ntBASIC14.9□□□□□ -0.02
FOXG1P55316 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FOXG1P55316 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FOXG1P55316 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXG1P55316 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms