Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKN2DP55273 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN2DP55273 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKN2DP55273 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKN2DP55273 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKN2DP55273 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN2DP55273 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDKN2DP55273 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDKN2DP55273 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.83■□□□□ 0.29
CDKN2DP55273 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKN2DP55273 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 AL391256.1-201ENST00000443260 1855 ntBASIC16.83■□□□□ 0.28
CDKN2DP55273 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKN2DP55273 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDKN2DP55273 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKN2DP55273 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKN2DP55273 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.83■□□□□ 0.28
CDKN2DP55273 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDKN2DP55273 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CDKN2DP55273 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 CLEC4GP1-201ENST00000596555 870 ntBASIC16.83■□□□□ 0.28
CDKN2DP55273 AL139424.1-201ENST00000607572 797 ntBASIC16.83■□□□□ 0.28
CDKN2DP55273 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKN2DP55273 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDKN2DP55273 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDKN2DP55273 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
CDKN2DP55273 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKN2DP55273 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKN2DP55273 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.82■□□□□ 0.28
CDKN2DP55273 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDKN2DP55273 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDKN2DP55273 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.82■□□□□ 0.28
CDKN2DP55273 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.82■□□□□ 0.28
CDKN2DP55273 AF238378.1-201ENST00000526806 358 ntBASIC16.82■□□□□ 0.28
CDKN2DP55273 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDKN2DP55273 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.82■□□□□ 0.28
CDKN2DP55273 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.82■□□□□ 0.28
CDKN2DP55273 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKN2DP55273 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKN2DP55273 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.82■□□□□ 0.28
CDKN2DP55273 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKN2DP55273 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDKN2DP55273 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKN2DP55273 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 AL021920.2-201ENST00000624828 1351 ntBASIC16.81■□□□□ 0.28
CDKN2DP55273 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDKN2DP55273 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKN2DP55273 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.81■□□□□ 0.28
CDKN2DP55273 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDKN2DP55273 SAPCD2P3-201ENST00000455031 850 ntBASIC16.81■□□□□ 0.28
CDKN2DP55273 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.81■□□□□ 0.28
CDKN2DP55273 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.81■□□□□ 0.28
CDKN2DP55273 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKN2DP55273 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKN2DP55273 AC025062.2-201ENST00000605477 670 ntBASIC16.81■□□□□ 0.28
CDKN2DP55273 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKN2DP55273 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKN2DP55273 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms