Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CX3CR1P49238 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CX3CR1P49238 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 GPR89P-201ENST00000407924 1495 ntBASIC15.03■□□□□ -0
CX3CR1P49238 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CX3CR1P49238 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
CX3CR1P49238 AL020989.1-201ENST00000422979 469 ntBASIC15.03■□□□□ -0
CX3CR1P49238 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.03■□□□□ -0
CX3CR1P49238 SIGLEC30P-201ENST00000455569 941 ntBASIC15.03■□□□□ -0
CX3CR1P49238 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.03■□□□□ -0
CX3CR1P49238 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.03■□□□□ -0
CX3CR1P49238 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.03■□□□□ -0
CX3CR1P49238 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CX3CR1P49238 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CX3CR1P49238 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 AC148477.5-201ENST00000625164 1645 ntBASIC15.03■□□□□ -0
CX3CR1P49238 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.03■□□□□ -0
CX3CR1P49238 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.02■□□□□ -0
CX3CR1P49238 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.02■□□□□ -0
CX3CR1P49238 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.02■□□□□ -0
CX3CR1P49238 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
CX3CR1P49238 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CX3CR1P49238 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CX3CR1P49238 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CX3CR1P49238 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.02■□□□□ -0
CX3CR1P49238 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CX3CR1P49238 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CX3CR1P49238 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CX3CR1P49238 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 ATP5G2P1-201ENST00000433580 426 ntBASIC15.02■□□□□ -0
CX3CR1P49238 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CX3CR1P49238 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 AL445228.2-201ENST00000605589 952 ntBASIC15.02■□□□□ -0
CX3CR1P49238 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.02■□□□□ -0
CX3CR1P49238 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.02■□□□□ -0
CX3CR1P49238 AC093458.2-201ENST00000623150 629 ntBASIC15.02■□□□□ -0
CX3CR1P49238 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.02□□□□□ -0.01
CX3CR1P49238 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CX3CR1P49238 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CX3CR1P49238 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CX3CR1P49238 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CX3CR1P49238 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CX3CR1P49238 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.02□□□□□ -0.01
CX3CR1P49238 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CX3CR1P49238 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
CX3CR1P49238 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CX3CR1P49238 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CX3CR1P49238 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.01□□□□□ -0.01
CX3CR1P49238 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CX3CR1P49238 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms