Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.19■□□□□ 0.82
TNNI2P48788 AC109635.5-201ENST00000533593 962 ntBASIC20.19■□□□□ 0.82
TNNI2P48788 AC190387.1-201ENST00000551683 408 ntBASIC20.19■□□□□ 0.82
TNNI2P48788 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.19■□□□□ 0.82
TNNI2P48788 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.19■□□□□ 0.82
TNNI2P48788 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI2P48788 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI2P48788 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI2P48788 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TNNI2P48788 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI2P48788 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TNNI2P48788 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNNI2P48788 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.19■□□□□ 0.82
TNNI2P48788 AL353732.1-201ENST00000569618 1459 ntBASIC20.18■□□□□ 0.82
TNNI2P48788 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TNNI2P48788 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TNNI2P48788 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.18■□□□□ 0.82
TNNI2P48788 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNNI2P48788 SPDYE7P-202ENST00000420373 878 ntBASIC20.18■□□□□ 0.82
TNNI2P48788 AC107890.1-201ENST00000422478 521 ntBASIC20.18■□□□□ 0.82
TNNI2P48788 GPS2P2-201ENST00000430745 888 ntBASIC20.18■□□□□ 0.82
TNNI2P48788 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 SLC25A6P5-201ENST00000435663 894 ntBASIC20.18■□□□□ 0.82
TNNI2P48788 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.18■□□□□ 0.82
TNNI2P48788 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.18■□□□□ 0.82
TNNI2P48788 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.18■□□□□ 0.82
TNNI2P48788 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.18■□□□□ 0.82
TNNI2P48788 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.18■□□□□ 0.82
TNNI2P48788 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 AL133373.2-201ENST00000623187 2828 ntBASIC20.18■□□□□ 0.82
TNNI2P48788 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNNI2P48788 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.18■□□□□ 0.82
TNNI2P48788 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TNNI2P48788 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TNNI2P48788 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.17■□□□□ 0.82
TNNI2P48788 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.17■□□□□ 0.82
TNNI2P48788 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.17■□□□□ 0.82
TNNI2P48788 HCG4-201ENST00000418983 998 ntBASIC20.17■□□□□ 0.82
TNNI2P48788 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.17■□□□□ 0.82
TNNI2P48788 AC125807.1-201ENST00000483097 614 ntBASIC20.17■□□□□ 0.82
TNNI2P48788 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.17■□□□□ 0.82
TNNI2P48788 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.17■□□□□ 0.82
TNNI2P48788 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.17■□□□□ 0.82
TNNI2P48788 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TNNI2P48788 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.17■□□□□ 0.82
TNNI2P48788 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TNNI2P48788 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNNI2P48788 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.16■□□□□ 0.82
TNNI2P48788 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.16■□□□□ 0.82
TNNI2P48788 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.16■□□□□ 0.82
TNNI2P48788 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TNNI2P48788 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNNI2P48788 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.16■□□□□ 0.82
TNNI2P48788 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.16■□□□□ 0.82
TNNI2P48788 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.16■□□□□ 0.82
TNNI2P48788 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms