Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 HLA-A-202ENST00000376806 1854 ntBASIC16.44■□□□□ 0.22
SLC6A12P48065 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC6A12P48065 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SLC6A12P48065 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC6A12P48065 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC6A12P48065 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SLC6A12P48065 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SLC6A12P48065 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC6A12P48065 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC6A12P48065 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.43■□□□□ 0.22
SLC6A12P48065 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.43■□□□□ 0.22
SLC6A12P48065 RPS15P9-201ENST00000494093 319 ntBASIC16.43■□□□□ 0.22
SLC6A12P48065 SLC25A6P2-201ENST00000497974 877 ntBASIC16.43■□□□□ 0.22
SLC6A12P48065 AC136632.2-201ENST00000512891 861 ntBASIC16.43■□□□□ 0.22
SLC6A12P48065 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC6A12P48065 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC6A12P48065 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 AC092171.3-201ENST00000610122 2651 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SLC6A12P48065 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 AC124067.4-201ENST00000519691 2379 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 FAAHP1-202ENST00000446499 1238 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC6A12P48065 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 AF186996.4-201ENST00000467186 377 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.42■□□□□ 0.22
SLC6A12P48065 AC012640.2-201ENST00000561606 901 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC6A12P48065 AC104692.2-201ENST00000603054 253 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 AL031008.1-201ENST00000619963 541 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 AC148477.8-201ENST00000624298 468 ntBASIC16.42■□□□□ 0.22
SLC6A12P48065 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC6A12P48065 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A12P48065 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A12P48065 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SLC6A12P48065 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 AC006277.1-201ENST00000624348 1610 ntBASIC16.41■□□□□ 0.22
SLC6A12P48065 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC6A12P48065 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC6A12P48065 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 AC004870.1-201ENST00000315132 882 ntBASIC16.41■□□□□ 0.22
SLC6A12P48065 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A12P48065 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC6A12P48065 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms