Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.02■□□□□ 0.8
NEDD4P46934 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NEDD4P46934 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 AC084018.2-201ENST00000613093 2607 ntBASIC20.02■□□□□ 0.8
NEDD4P46934 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NEDD4P46934 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.02■□□□□ 0.79
NEDD4P46934 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NEDD4P46934 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEDD4P46934 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
NEDD4P46934 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEDD4P46934 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEDD4P46934 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
NEDD4P46934 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.02■□□□□ 0.79
NEDD4P46934 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.02■□□□□ 0.79
NEDD4P46934 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.02■□□□□ 0.79
NEDD4P46934 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
NEDD4P46934 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.02■□□□□ 0.79
NEDD4P46934 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.01■□□□□ 0.79
NEDD4P46934 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.01■□□□□ 0.79
NEDD4P46934 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NEDD4P46934 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NEDD4P46934 AC129492.6-201ENST00000611383 1305 ntBASIC20.01■□□□□ 0.79
NEDD4P46934 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
NEDD4P46934 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NEDD4P46934 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NEDD4P46934 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.01■□□□□ 0.79
NEDD4P46934 RHOQP3-201ENST00000437982 621 ntBASIC20.01■□□□□ 0.79
NEDD4P46934 RNA5SP416-201ENST00000516838 111 ntBASIC20.01■□□□□ 0.79
NEDD4P46934 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.01■□□□□ 0.79
NEDD4P46934 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.01■□□□□ 0.79
NEDD4P46934 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.01■□□□□ 0.79
NEDD4P46934 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 AL513190.1-201ENST00000621254 727 ntBASIC20.01■□□□□ 0.79
NEDD4P46934 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.01■□□□□ 0.79
NEDD4P46934 AC092865.6-201ENST00000642101 219 ntBASIC20.01■□□□□ 0.79
NEDD4P46934 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NEDD4P46934 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20■□□□□ 0.79
NEDD4P46934 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20■□□□□ 0.79
NEDD4P46934 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20■□□□□ 0.79
NEDD4P46934 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20■□□□□ 0.79
NEDD4P46934 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20■□□□□ 0.79
NEDD4P46934 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
NEDD4P46934 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20■□□□□ 0.79
NEDD4P46934 AC096734.2-201ENST00000562054 433 ntBASIC20■□□□□ 0.79
NEDD4P46934 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NEDD4P46934 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20■□□□□ 0.79
NEDD4P46934 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.99■□□□□ 0.79
NEDD4P46934 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NEDD4P46934 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.99■□□□□ 0.79
NEDD4P46934 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 RNF216P1-203ENST00000404404 2427 ntBASIC19.99■□□□□ 0.79
NEDD4P46934 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 AL021920.2-201ENST00000624828 1351 ntBASIC19.99■□□□□ 0.79
NEDD4P46934 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.99■□□□□ 0.79
NEDD4P46934 AC023274.1-201ENST00000418278 595 ntBASIC19.99■□□□□ 0.79
NEDD4P46934 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.99■□□□□ 0.79
NEDD4P46934 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.99■□□□□ 0.79
NEDD4P46934 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.99■□□□□ 0.79
NEDD4P46934 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.99■□□□□ 0.79
NEDD4P46934 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NEDD4P46934 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms