Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC4P35249 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC4P35249 AC007541.1-201ENST00000570282 1469 ntBASIC21.22■□□□□ 0.99
RFC4P35249 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RFC4P35249 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RFC4P35249 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RFC4P35249 U91328.1-201ENST00000437528 223 ntBASIC21.22■□□□□ 0.99
RFC4P35249 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.22■□□□□ 0.99
RFC4P35249 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC4P35249 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.22■□□□□ 0.99
RFC4P35249 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 AC073389.1-201ENST00000595595 795 ntBASIC21.22■□□□□ 0.99
RFC4P35249 AC021097.1-201ENST00000607902 574 ntBASIC21.22■□□□□ 0.99
RFC4P35249 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC4P35249 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
RFC4P35249 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC4P35249 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC4P35249 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC4P35249 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RFC4P35249 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC4P35249 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RFC4P35249 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RFC4P35249 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RFC4P35249 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.21■□□□□ 0.99
RFC4P35249 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.21■□□□□ 0.99
RFC4P35249 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 KRT18P34-201ENST00000488218 1270 ntBASIC21.21■□□□□ 0.99
RFC4P35249 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 AC009407.1-201ENST00000568958 598 ntBASIC21.21■□□□□ 0.99
RFC4P35249 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC4P35249 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.21■□□□□ 0.99
RFC4P35249 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RFC4P35249 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 HCG11-201ENST00000411553 5696 ntBASIC21.21■□□□□ 0.99
RFC4P35249 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC4P35249 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC4P35249 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC4P35249 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC4P35249 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RFC4P35249 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RFC4P35249 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RFC4P35249 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 EGFEM1P-202ENST00000431685 1563 ntBASIC21.2■□□□□ 0.98
RFC4P35249 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC4P35249 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC4P35249 GPR53P-205ENST00000457298 1084 ntBASIC21.2■□□□□ 0.98
RFC4P35249 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.2■□□□□ 0.98
RFC4P35249 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.2■□□□□ 0.98
RFC4P35249 AL132655.2-201ENST00000596276 594 ntBASIC21.2■□□□□ 0.98
RFC4P35249 AC008738.7-201ENST00000609744 511 ntBASIC21.2■□□□□ 0.98
RFC4P35249 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC4P35249 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC4P35249 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC4P35249 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 AL035456.1-201ENST00000456064 1369 ntBASIC21.2■□□□□ 0.98
RFC4P35249 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC4P35249 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC4P35249 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC4P35249 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC4P35249 AC098818.2-201ENST00000564925 2320 ntBASIC21.2■□□□□ 0.98
RFC4P35249 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC4P35249 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms