Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA3P29320 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHA3P29320 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHA3P29320 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 AL353593.2-201ENST00000602529 1483 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 TERF1P1-201ENST00000311003 1181 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHA3P29320 AC113347.1-201ENST00000413321 391 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 TSPY5P-201ENST00000426936 936 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 AL137013.1-201ENST00000432946 1228 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 SPDYE13P-201ENST00000445314 798 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 GUSBP12-201ENST00000513727 720 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHA3P29320 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 AC005336.2-201ENST00000593183 939 ntBASIC16.63■□□□□ 0.25
EPHA3P29320 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EPHA3P29320 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHA3P29320 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHA3P29320 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHA3P29320 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 FAM220CP-201ENST00000395253 831 ntBASIC16.62■□□□□ 0.25
EPHA3P29320 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 HOMER2P1-201ENST00000455653 964 ntBASIC16.62■□□□□ 0.25
EPHA3P29320 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 STK19B-204ENST00000512515 211 ntBASIC16.62■□□□□ 0.25
EPHA3P29320 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHA3P29320 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EPHA3P29320 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHA3P29320 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHA3P29320 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
EPHA3P29320 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHA3P29320 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHA3P29320 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
EPHA3P29320 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHA3P29320 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms