Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CHMP24386 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CHMP24386 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16■□□□□ 0.15
CHMP24386 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16■□□□□ 0.15
CHMP24386 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 OR6D1P-203ENST00000641209 4860 ntBASIC16■□□□□ 0.15
CHMP24386 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16■□□□□ 0.15
CHMP24386 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16■□□□□ 0.15
CHMP24386 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CHMP24386 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CHMP24386 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 AL603756.1-201ENST00000606511 2163 ntBASIC15.99■□□□□ 0.15
CHMP24386 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP24386 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 AKR1C7P-201ENST00000305623 895 ntBASIC15.99■□□□□ 0.15
CHMP24386 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.99■□□□□ 0.15
CHMP24386 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP24386 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CHMP24386 RBM17P3-201ENST00000417687 1192 ntBASIC15.99■□□□□ 0.15
CHMP24386 ABCD1P5-201ENST00000445663 754 ntBASIC15.99■□□□□ 0.15
CHMP24386 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.99■□□□□ 0.15
CHMP24386 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.99■□□□□ 0.15
CHMP24386 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CHMP24386 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.99■□□□□ 0.15
CHMP24386 AL139327.4-201ENST00000612362 153 ntBASIC15.99■□□□□ 0.15
CHMP24386 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.99■□□□□ 0.15
CHMP24386 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CHMP24386 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CHMP24386 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.99■□□□□ 0.15
CHMP24386 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.99■□□□□ 0.15
CHMP24386 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP24386 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.98■□□□□ 0.15
CHMP24386 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.98■□□□□ 0.15
CHMP24386 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.98■□□□□ 0.15
CHMP24386 AC106795.1-205ENST00000512851 1056 ntBASIC15.98■□□□□ 0.15
CHMP24386 AL160237.2-201ENST00000556165 472 ntBASIC15.98■□□□□ 0.15
CHMP24386 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 AL121912.1-201ENST00000603683 238 ntBASIC15.98■□□□□ 0.15
CHMP24386 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CHMP24386 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CHMP24386 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP24386 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms