Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.35■□□□□ 0.37
NFKB1P19838 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NFKB1P19838 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NFKB1P19838 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NFKB1P19838 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.34■□□□□ 0.37
NFKB1P19838 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NFKB1P19838 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
NFKB1P19838 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
NFKB1P19838 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.34■□□□□ 0.37
NFKB1P19838 LAGE3P1-201ENST00000425356 484 ntBASIC17.34■□□□□ 0.37
NFKB1P19838 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.34■□□□□ 0.37
NFKB1P19838 RPS2P1-201ENST00000434010 821 ntBASIC17.34■□□□□ 0.37
NFKB1P19838 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.34■□□□□ 0.37
NFKB1P19838 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.34■□□□□ 0.37
NFKB1P19838 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.34■□□□□ 0.37
NFKB1P19838 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.34■□□□□ 0.37
NFKB1P19838 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.34■□□□□ 0.37
NFKB1P19838 AC073648.2-201ENST00000510116 352 ntBASIC17.34■□□□□ 0.37
NFKB1P19838 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.34■□□□□ 0.37
NFKB1P19838 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.34■□□□□ 0.37
NFKB1P19838 AC006504.4-201ENST00000592118 1568 ntBASIC17.34■□□□□ 0.37
NFKB1P19838 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.34■□□□□ 0.37
NFKB1P19838 AL121912.1-201ENST00000603683 238 ntBASIC17.34■□□□□ 0.37
NFKB1P19838 AC107918.4-202ENST00000641623 219 ntBASIC17.34■□□□□ 0.37
NFKB1P19838 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NFKB1P19838 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.33■□□□□ 0.37
NFKB1P19838 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.33■□□□□ 0.37
NFKB1P19838 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
NFKB1P19838 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.33■□□□□ 0.37
NFKB1P19838 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NFKB1P19838 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NFKB1P19838 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
NFKB1P19838 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 TUBB8P12-201ENST00000308911 1335 ntBASIC17.33■□□□□ 0.36
NFKB1P19838 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 TUBB7P-202ENST00000428444 1305 ntBASIC17.33■□□□□ 0.36
NFKB1P19838 TUBB8P7-204ENST00000567960 1332 ntBASIC17.33■□□□□ 0.36
NFKB1P19838 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.33■□□□□ 0.36
NFKB1P19838 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.33■□□□□ 0.36
NFKB1P19838 AL691432.3-201ENST00000621860 400 ntBASIC17.33■□□□□ 0.36
NFKB1P19838 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.33■□□□□ 0.36
NFKB1P19838 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NFKB1P19838 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.33■□□□□ 0.36
NFKB1P19838 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.33■□□□□ 0.36
NFKB1P19838 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NFKB1P19838 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.32■□□□□ 0.36
NFKB1P19838 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NFKB1P19838 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NFKB1P19838 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.32■□□□□ 0.36
NFKB1P19838 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms