Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC28.72■■■□□ 2.19
CFTRP13569 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC28.72■■■□□ 2.19
CFTRP13569 RNA5SP410-201ENST00000516285 106 ntBASIC28.72■■■□□ 2.19
CFTRP13569 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC28.72■■■□□ 2.19
CFTRP13569 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
CFTRP13569 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
CFTRP13569 RPSAP52-203ENST00000622976 1023 ntBASIC28.72■■■□□ 2.19
CFTRP13569 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CFTRP13569 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC28.71■■■□□ 2.19
CFTRP13569 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC28.71■■■□□ 2.19
CFTRP13569 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFTRP13569 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC28.71■■■□□ 2.19
CFTRP13569 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC28.71■■■□□ 2.19
CFTRP13569 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC28.71■■■□□ 2.19
CFTRP13569 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC28.71■■■□□ 2.19
CFTRP13569 FAM86MP-201ENST00000340703 885 ntBASIC28.71■■■□□ 2.19
CFTRP13569 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CFTRP13569 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
CFTRP13569 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC28.71■■■□□ 2.19
CFTRP13569 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC28.71■■■□□ 2.19
CFTRP13569 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CFTRP13569 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CFTRP13569 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CFTRP13569 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CFTRP13569 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
CFTRP13569 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC28.7■■■□□ 2.19
CFTRP13569 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC28.7■■■□□ 2.19
CFTRP13569 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC28.7■■■□□ 2.19
CFTRP13569 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
CFTRP13569 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC28.7■■■□□ 2.18
CFTRP13569 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
CFTRP13569 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
CFTRP13569 OSM-203ENST00000403463 464 ntTSL 3 BASIC28.7■■■□□ 2.18
CFTRP13569 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFTRP13569 KRT223P-202ENST00000449164 1292 ntBASIC28.7■■■□□ 2.18
CFTRP13569 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFTRP13569 AC023310.3-201ENST00000557027 670 ntBASIC28.7■■■□□ 2.18
CFTRP13569 AC100756.1-201ENST00000562736 682 ntBASIC28.7■■■□□ 2.18
CFTRP13569 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC28.7■■■□□ 2.18
CFTRP13569 AC138749.3-201ENST00000567691 622 ntBASIC28.7■■■□□ 2.18
CFTRP13569 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC28.7■■■□□ 2.18
CFTRP13569 AC084346.2-201ENST00000607097 949 ntBASIC28.7■■■□□ 2.18
CFTRP13569 FHL2-212ENST00000607522 759 ntTSL 2 BASIC28.7■■■□□ 2.18
CFTRP13569 AC116165.1-201ENST00000611806 668 ntBASIC28.7■■■□□ 2.18
CFTRP13569 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC28.7■■■□□ 2.18
CFTRP13569 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFTRP13569 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CFTRP13569 AP000974.1-201ENST00000623909 2387 ntBASIC28.7■■■□□ 2.18
CFTRP13569 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
CFTRP13569 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
CFTRP13569 AL355312.1-201ENST00000407115 2176 ntBASIC28.69■■■□□ 2.18
CFTRP13569 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC28.69■■■□□ 2.18
CFTRP13569 AP005482.1-201ENST00000563722 1273 ntBASIC28.69■■■□□ 2.18
CFTRP13569 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC28.69■■■□□ 2.18
CFTRP13569 AC008735.3-201ENST00000596646 500 ntBASIC28.69■■■□□ 2.18
CFTRP13569 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC28.69■■■□□ 2.18
CFTRP13569 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC28.69■■■□□ 2.18
CFTRP13569 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CFTRP13569 REXO1L6P-201ENST00000603433 1515 ntBASIC28.68■■■□□ 2.18
CFTRP13569 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CFTRP13569 HIST1H2BPS3-201ENST00000419683 341 ntBASIC28.68■■■□□ 2.18
CFTRP13569 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC28.68■■■□□ 2.18
CFTRP13569 AL589987.1-201ENST00000453380 819 ntBASIC28.68■■■□□ 2.18
CFTRP13569 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC28.68■■■□□ 2.18
CFTRP13569 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC28.68■■■□□ 2.18
CFTRP13569 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
CFTRP13569 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC28.68■■■□□ 2.18
CFTRP13569 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC28.68■■■□□ 2.18
CFTRP13569 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC28.68■■■□□ 2.18
CFTRP13569 AC108860.2-201ENST00000562760 2183 ntBASIC28.68■■■□□ 2.18
CFTRP13569 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CFTRP13569 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CFTRP13569 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC28.67■■■□□ 2.18
CFTRP13569 SPDYE17-201ENST00000412399 783 ntBASIC28.67■■■□□ 2.18
CFTRP13569 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC28.67■■■□□ 2.18
CFTRP13569 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
CFTRP13569 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
CFTRP13569 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.67■■■□□ 2.18
CFTRP13569 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CFTRP13569 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC28.67■■■□□ 2.18
CFTRP13569 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
CFTRP13569 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CFTRP13569 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC28.67■■■□□ 2.18
CFTRP13569 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC28.67■■■□□ 2.18
CFTRP13569 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms