Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CROCCP2-202ENST00000412962 2773 ntBASIC20.02■□□□□ 0.8
TOP1P11387 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TOP1P11387 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TOP1P11387 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TOP1P11387 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TOP1P11387 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.01■□□□□ 0.79
TOP1P11387 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.01■□□□□ 0.79
TOP1P11387 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TOP1P11387 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TOP1P11387 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TOP1P11387 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TOP1P11387 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.01■□□□□ 0.79
TOP1P11387 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.01■□□□□ 0.79
TOP1P11387 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.01■□□□□ 0.79
TOP1P11387 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.01■□□□□ 0.79
TOP1P11387 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.01■□□□□ 0.79
TOP1P11387 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.01■□□□□ 0.79
TOP1P11387 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TOP1P11387 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.01■□□□□ 0.79
TOP1P11387 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TOP1P11387 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.01■□□□□ 0.79
TOP1P11387 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP1P11387 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TOP1P11387 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TOP1P11387 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
TOP1P11387 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TOP1P11387 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20■□□□□ 0.79
TOP1P11387 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20■□□□□ 0.79
TOP1P11387 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20■□□□□ 0.79
TOP1P11387 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20■□□□□ 0.79
TOP1P11387 CD63-210ENST00000550776 870 ntTSL 5 BASIC20■□□□□ 0.79
TOP1P11387 AC096734.2-201ENST00000562054 433 ntBASIC20■□□□□ 0.79
TOP1P11387 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20■□□□□ 0.79
TOP1P11387 AC018845.2-201ENST00000568326 409 ntBASIC20■□□□□ 0.79
TOP1P11387 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20■□□□□ 0.79
TOP1P11387 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20■□□□□ 0.79
TOP1P11387 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP1P11387 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 AC023274.1-201ENST00000418278 595 ntBASIC19.99■□□□□ 0.79
TOP1P11387 BX842568.4-201ENST00000421222 227 ntBASIC19.99■□□□□ 0.79
TOP1P11387 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.99■□□□□ 0.79
TOP1P11387 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.99■□□□□ 0.79
TOP1P11387 AC010507.1-201ENST00000633895 436 ntBASIC19.99■□□□□ 0.79
TOP1P11387 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.99■□□□□ 0.79
TOP1P11387 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
TOP1P11387 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP1P11387 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TOP1P11387 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP1P11387 AC002310.6-201ENST00000624451 1377 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms