Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPRFP10586 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTPRFP10586 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTPRFP10586 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPRFP10586 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPRFP10586 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPRFP10586 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPRFP10586 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPRFP10586 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTPRFP10586 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPRFP10586 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTPRFP10586 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PTPRFP10586 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPRFP10586 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPRFP10586 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PTPRFP10586 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PTPRFP10586 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 IGHV3-71-201ENST00000523324 359 ntBASIC19.3■□□□□ 0.68
PTPRFP10586 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 ZNF890P-202ENST00000530367 1156 ntBASIC19.3■□□□□ 0.68
PTPRFP10586 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPRFP10586 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPRFP10586 AC140912.1-201ENST00000577171 1054 ntBASIC19.3■□□□□ 0.68
PTPRFP10586 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.3■□□□□ 0.68
PTPRFP10586 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPRFP10586 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPRFP10586 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PTPRFP10586 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 MTND6P24-201ENST00000440466 518 ntBASIC19.29■□□□□ 0.68
PTPRFP10586 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPRFP10586 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 AC104794.3-201ENST00000566840 1248 ntBASIC19.29■□□□□ 0.68
PTPRFP10586 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPRFP10586 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPRFP10586 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 AL353705.2-201ENST00000428243 662 ntBASIC19.29■□□□□ 0.68
PTPRFP10586 RNA5SP410-201ENST00000516285 106 ntBASIC19.29■□□□□ 0.68
PTPRFP10586 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.29■□□□□ 0.68
PTPRFP10586 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPRFP10586 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.29■□□□□ 0.68
PTPRFP10586 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPRFP10586 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPRFP10586 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.29■□□□□ 0.68
PTPRFP10586 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
PTPRFP10586 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPRFP10586 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTPRFP10586 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 CETN4P-206ENST00000642099 2168 ntBASIC19.28■□□□□ 0.68
PTPRFP10586 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.28■□□□□ 0.68
PTPRFP10586 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 AL512361.1-201ENST00000554200 418 ntBASIC19.28■□□□□ 0.68
PTPRFP10586 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.28■□□□□ 0.68
PTPRFP10586 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.28■□□□□ 0.68
PTPRFP10586 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 AP001350.2-201ENST00000625104 1094 ntBASIC19.28■□□□□ 0.68
PTPRFP10586 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPRFP10586 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PTPRFP10586 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.28■□□□□ 0.68
PTPRFP10586 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPRFP10586 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPRFP10586 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPRFP10586 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPRFP10586 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PTPRFP10586 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPRFP10586 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPRFP10586 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPRFP10586 CR383656.12-201ENST00000549567 513 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms