Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.86■□□□□ 0.61
TPM1P09493 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM1P09493 CYP2T1P-202ENST00000641596 2535 ntBASIC18.85■□□□□ 0.61
TPM1P09493 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TPM1P09493 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TPM1P09493 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 NORAD-201ENST00000565493 5339 ntBASIC18.85■□□□□ 0.61
TPM1P09493 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM1P09493 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TPM1P09493 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
TPM1P09493 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM1P09493 AC092597.1-201ENST00000487352 616 ntBASIC18.85■□□□□ 0.61
TPM1P09493 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.85■□□□□ 0.61
TPM1P09493 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.85■□□□□ 0.61
TPM1P09493 AC145285.6-201ENST00000604632 637 ntBASIC18.85■□□□□ 0.61
TPM1P09493 TMEM191A-211ENST00000637163 1067 ntBASIC18.85■□□□□ 0.61
TPM1P09493 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM1P09493 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM1P09493 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
TPM1P09493 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM1P09493 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM1P09493 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM1P09493 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TPM1P09493 AC067930.6-201ENST00000623257 4947 ntBASIC18.84■□□□□ 0.61
TPM1P09493 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM1P09493 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM1P09493 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM1P09493 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM1P09493 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM1P09493 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM1P09493 AC005332.3-201ENST00000589904 676 ntBASIC18.84■□□□□ 0.61
TPM1P09493 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 AC006449.5-201ENST00000610658 2098 ntBASIC18.84■□□□□ 0.61
TPM1P09493 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TPM1P09493 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM1P09493 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM1P09493 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM1P09493 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM1P09493 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
TPM1P09493 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM1P09493 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TPM1P09493 AL513523.2-202ENST00000427283 2040 ntBASIC18.83■□□□□ 0.61
TPM1P09493 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM1P09493 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM1P09493 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.83■□□□□ 0.61
TPM1P09493 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM1P09493 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM1P09493 AC103564.2-201ENST00000432853 1299 ntBASIC18.83■□□□□ 0.6
TPM1P09493 AC007967.3-201ENST00000434308 558 ntBASIC18.83■□□□□ 0.6
TPM1P09493 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.83■□□□□ 0.6
TPM1P09493 AP002490.2-201ENST00000524791 560 ntBASIC18.83■□□□□ 0.6
TPM1P09493 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.83■□□□□ 0.6
TPM1P09493 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.83■□□□□ 0.6
TPM1P09493 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM1P09493 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TPM1P09493 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM1P09493 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TPM1P09493 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM1P09493 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM1P09493 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TPM1P09493 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
TPM1P09493 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TPM1P09493 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.83■□□□□ 0.6
TPM1P09493 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM1P09493 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.82■□□□□ 0.6
TPM1P09493 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM1P09493 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms