Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.16■□□□□ 0.34
SRPRAP08240 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.16■□□□□ 0.34
SRPRAP08240 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.16■□□□□ 0.34
SRPRAP08240 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.16■□□□□ 0.34
SRPRAP08240 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 AP001350.2-201ENST00000625104 1094 ntBASIC17.16■□□□□ 0.34
SRPRAP08240 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SRPRAP08240 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRPRAP08240 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.15■□□□□ 0.34
SRPRAP08240 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SRPRAP08240 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SRPRAP08240 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.15■□□□□ 0.34
SRPRAP08240 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SRPRAP08240 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.15■□□□□ 0.34
SRPRAP08240 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SRPRAP08240 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.15■□□□□ 0.34
SRPRAP08240 FAM86C2P-203ENST00000528684 1004 ntBASIC17.15■□□□□ 0.34
SRPRAP08240 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.15■□□□□ 0.34
SRPRAP08240 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.15■□□□□ 0.34
SRPRAP08240 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
SRPRAP08240 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRPRAP08240 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
SRPRAP08240 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.14■□□□□ 0.33
SRPRAP08240 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SRPRAP08240 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SRPRAP08240 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
SRPRAP08240 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.14■□□□□ 0.33
SRPRAP08240 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.14■□□□□ 0.33
SRPRAP08240 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.14■□□□□ 0.33
SRPRAP08240 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SRPRAP08240 AC087641.1-201ENST00000557561 1021 ntBASIC17.14■□□□□ 0.33
SRPRAP08240 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.14■□□□□ 0.33
SRPRAP08240 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SRPRAP08240 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.14■□□□□ 0.33
SRPRAP08240 AL161645.1-201ENST00000622716 1255 ntBASIC17.14■□□□□ 0.33
SRPRAP08240 AL513210.1-201ENST00000629608 234 ntBASIC17.14■□□□□ 0.33
SRPRAP08240 AC105339.1-204ENST00000636249 355 ntBASIC17.14■□□□□ 0.33
SRPRAP08240 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SRPRAP08240 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.14■□□□□ 0.33
SRPRAP08240 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.14■□□□□ 0.33
SRPRAP08240 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.14■□□□□ 0.33
SRPRAP08240 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SRPRAP08240 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SRPRAP08240 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.14■□□□□ 0.33
SRPRAP08240 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRPRAP08240 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.14■□□□□ 0.33
SRPRAP08240 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.13■□□□□ 0.33
SRPRAP08240 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRPRAP08240 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SRPRAP08240 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms