Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SFTPBP07988 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 AC116353.5-201ENST00000638148 1699 ntBASIC14.88□□□□□ -0.03
SFTPBP07988 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 PCDHB19P-201ENST00000570871 2371 ntBASIC14.88□□□□□ -0.03
SFTPBP07988 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SFTPBP07988 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 AL450487.1-201ENST00000426799 995 ntBASIC14.88□□□□□ -0.03
SFTPBP07988 AC007967.3-201ENST00000434308 558 ntBASIC14.88□□□□□ -0.03
SFTPBP07988 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.88□□□□□ -0.03
SFTPBP07988 RN7SL606P-201ENST00000472779 293 ntBASIC14.88□□□□□ -0.03
SFTPBP07988 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.88□□□□□ -0.03
SFTPBP07988 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.88□□□□□ -0.03
SFTPBP07988 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.88□□□□□ -0.03
SFTPBP07988 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 CICP6-201ENST00000457191 2729 ntBASIC14.88□□□□□ -0.03
SFTPBP07988 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SFTPBP07988 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.88□□□□□ -0.03
SFTPBP07988 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFTPBP07988 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
SFTPBP07988 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
SFTPBP07988 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.87□□□□□ -0.03
SFTPBP07988 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.87□□□□□ -0.03
SFTPBP07988 AC060834.1-201ENST00000443027 2032 ntBASIC14.87□□□□□ -0.03
SFTPBP07988 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.87□□□□□ -0.03
SFTPBP07988 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.87□□□□□ -0.03
SFTPBP07988 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.87□□□□□ -0.03
SFTPBP07988 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.87□□□□□ -0.03
SFTPBP07988 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.87□□□□□ -0.03
SFTPBP07988 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.87□□□□□ -0.03
SFTPBP07988 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.87□□□□□ -0.03
SFTPBP07988 AL121894.2-201ENST00000602977 491 ntBASIC14.87□□□□□ -0.03
SFTPBP07988 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.87□□□□□ -0.03
SFTPBP07988 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SFTPBP07988 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.86□□□□□ -0.03
SFTPBP07988 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SFTPBP07988 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SFTPBP07988 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SFTPBP07988 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SFTPBP07988 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SFTPBP07988 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SFTPBP07988 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SFTPBP07988 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.86□□□□□ -0.03
SFTPBP07988 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SFTPBP07988 TSPY26P-202ENST00000565928 3884 ntBASIC14.86□□□□□ -0.03
SFTPBP07988 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms