Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BEST1O76090 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST1O76090 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.84■□□□□ 0.45
BEST1O76090 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.83■□□□□ 0.45
BEST1O76090 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BEST1O76090 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
BEST1O76090 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BEST1O76090 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BEST1O76090 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BEST1O76090 GPX1P2-201ENST00000429271 606 ntBASIC17.83■□□□□ 0.44
BEST1O76090 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST1O76090 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 AC074386.1-202ENST00000463561 864 ntBASIC17.83■□□□□ 0.44
BEST1O76090 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BEST1O76090 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.83■□□□□ 0.44
BEST1O76090 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.83■□□□□ 0.44
BEST1O76090 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.83■□□□□ 0.44
BEST1O76090 AC055717.3-201ENST00000622967 595 ntBASIC17.83■□□□□ 0.44
BEST1O76090 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
BEST1O76090 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BEST1O76090 AC138932.1-201ENST00000534164 6830 ntBASIC17.83■□□□□ 0.44
BEST1O76090 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.83■□□□□ 0.44
BEST1O76090 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
BEST1O76090 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BEST1O76090 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.83■□□□□ 0.44
BEST1O76090 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.82■□□□□ 0.44
BEST1O76090 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
BEST1O76090 AL021920.2-201ENST00000624828 1351 ntBASIC17.82■□□□□ 0.44
BEST1O76090 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 HMGA1P7-201ENST00000406908 502 ntBASIC17.82■□□□□ 0.44
BEST1O76090 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.82■□□□□ 0.44
BEST1O76090 UPF3AP3-201ENST00000420996 769 ntBASIC17.82■□□□□ 0.44
BEST1O76090 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.82■□□□□ 0.44
BEST1O76090 ALG1L5P-201ENST00000482043 771 ntBASIC17.82■□□□□ 0.44
BEST1O76090 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.82■□□□□ 0.44
BEST1O76090 MPDU1-223ENST00000582151 728 ntBASIC17.82■□□□□ 0.44
BEST1O76090 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.82■□□□□ 0.44
BEST1O76090 MTDHP5-201ENST00000598980 586 ntBASIC17.82■□□□□ 0.44
BEST1O76090 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.82■□□□□ 0.44
BEST1O76090 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BEST1O76090 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BEST1O76090 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BEST1O76090 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
BEST1O76090 AL353732.1-201ENST00000569618 1459 ntBASIC17.82■□□□□ 0.44
BEST1O76090 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 AC022211.2-201ENST00000585075 2527 ntBASIC17.81■□□□□ 0.44
BEST1O76090 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BEST1O76090 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.81■□□□□ 0.44
BEST1O76090 AL121761.2-201ENST00000598007 1648 ntBASIC17.81■□□□□ 0.44
BEST1O76090 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.81■□□□□ 0.44
BEST1O76090 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.81■□□□□ 0.44
BEST1O76090 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.81■□□□□ 0.44
BEST1O76090 AC005412.3-201ENST00000580309 715 ntBASIC17.81■□□□□ 0.44
BEST1O76090 MIR4515-201ENST00000584082 81 ntBASIC17.81■□□□□ 0.44
BEST1O76090 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.81■□□□□ 0.44
BEST1O76090 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms