Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIOO75962 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIOO75962 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIOO75962 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIOO75962 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIOO75962 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIOO75962 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIOO75962 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIOO75962 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIOO75962 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIOO75962 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TRIOO75962 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIOO75962 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIOO75962 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIOO75962 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.12■□□□□ 0.33
TRIOO75962 AC098818.2-201ENST00000564925 2320 ntBASIC17.12■□□□□ 0.33
TRIOO75962 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIOO75962 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIOO75962 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIOO75962 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIOO75962 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIOO75962 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIOO75962 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIOO75962 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIOO75962 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIOO75962 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIOO75962 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRIOO75962 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
TRIOO75962 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIOO75962 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRIOO75962 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIOO75962 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 AC131009.4-201ENST00000624048 1740 ntBASIC17.11■□□□□ 0.33
TRIOO75962 AL355312.1-201ENST00000407115 2176 ntBASIC17.11■□□□□ 0.33
TRIOO75962 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIOO75962 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIOO75962 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIOO75962 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIOO75962 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIOO75962 RN7SL190P-201ENST00000582519 257 ntBASIC17.1■□□□□ 0.33
TRIOO75962 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
TRIOO75962 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIOO75962 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIOO75962 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIOO75962 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIOO75962 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIOO75962 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIOO75962 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 MYCLP2-201ENST00000449268 967 ntBASIC17.1■□□□□ 0.33
TRIOO75962 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIOO75962 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIOO75962 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIOO75962 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIOO75962 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIOO75962 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms