Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.88□□□□□ -0.03
UPK1BO75841 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 UNC93B4-201ENST00000505679 747 ntBASIC14.88□□□□□ -0.03
UPK1BO75841 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
UPK1BO75841 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.88□□□□□ -0.03
UPK1BO75841 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
UPK1BO75841 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.88□□□□□ -0.03
UPK1BO75841 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.87□□□□□ -0.03
UPK1BO75841 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.87□□□□□ -0.03
UPK1BO75841 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 AC106881.1-201ENST00000605849 3329 ntBASIC14.87□□□□□ -0.03
UPK1BO75841 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.87□□□□□ -0.03
UPK1BO75841 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
UPK1BO75841 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 FAM207BP-201ENST00000447172 505 ntBASIC14.87□□□□□ -0.03
UPK1BO75841 AC008040.2-201ENST00000461049 708 ntBASIC14.87□□□□□ -0.03
UPK1BO75841 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.87□□□□□ -0.03
UPK1BO75841 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.87□□□□□ -0.03
UPK1BO75841 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.87□□□□□ -0.03
UPK1BO75841 AC131212.1-201ENST00000613771 668 ntBASIC14.87□□□□□ -0.03
UPK1BO75841 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.87□□□□□ -0.03
UPK1BO75841 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.87□□□□□ -0.03
UPK1BO75841 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
UPK1BO75841 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1BO75841 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UPK1BO75841 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1BO75841 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1BO75841 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UPK1BO75841 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.86□□□□□ -0.03
UPK1BO75841 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 AC105036.2-201ENST00000569468 176 ntBASIC14.86□□□□□ -0.03
UPK1BO75841 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1BO75841 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms