Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 KRT18P27-201ENST00000427733 1299 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.73■□□□□ 0.43
LRCH4O75427 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH4O75427 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.73■□□□□ 0.43
LRCH4O75427 AP002490.2-201ENST00000524791 560 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 KRT126P-201ENST00000549467 1181 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.73■□□□□ 0.43
LRCH4O75427 AL691432.3-201ENST00000621860 400 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRCH4O75427 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 AL391256.1-201ENST00000443260 1855 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH4O75427 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRCH4O75427 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LRCH4O75427 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 AC073621.1-201ENST00000392730 636 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.72■□□□□ 0.43
LRCH4O75427 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 AC018712.1-201ENST00000455767 687 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 RNPS1P1-201ENST00000507437 918 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 AC073648.2-201ENST00000510116 352 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 OR7E14P-202ENST00000530490 1290 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.72■□□□□ 0.43
LRCH4O75427 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.72■□□□□ 0.43
LRCH4O75427 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.72■□□□□ 0.43
LRCH4O75427 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.72■□□□□ 0.43
LRCH4O75427 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.72■□□□□ 0.43
LRCH4O75427 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 AL805961.1-202ENST00000641562 540 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRCH4O75427 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LRCH4O75427 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 LINC00895-201ENST00000629028 1637 ntBASIC17.72■□□□□ 0.43
LRCH4O75427 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH4O75427 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.72■□□□□ 0.43
LRCH4O75427 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH4O75427 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRCH4O75427 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRCH4O75427 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH4O75427 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRCH4O75427 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRCH4O75427 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRCH4O75427 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCH4O75427 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRCH4O75427 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCH4O75427 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH4O75427 HNRNPDP1-201ENST00000439535 754 ntBASIC17.71■□□□□ 0.43
LRCH4O75427 AC087163.2-201ENST00000457299 853 ntBASIC17.71■□□□□ 0.43
LRCH4O75427 RN7SL510P-201ENST00000581311 263 ntBASIC17.71■□□□□ 0.43
LRCH4O75427 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRCH4O75427 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH4O75427 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH4O75427 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms