Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
PFDN1O60925 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.23■□□□□ 0.03
PFDN1O60925 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.23■□□□□ 0.03
PFDN1O60925 MFSD11-216ENST00000590393 1141 ntBASIC15.23■□□□□ 0.03
PFDN1O60925 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.23■□□□□ 0.03
PFDN1O60925 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PFDN1O60925 LINC02012-201ENST00000608206 1725 ntBASIC15.23■□□□□ 0.03
PFDN1O60925 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.23■□□□□ 0.03
PFDN1O60925 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PFDN1O60925 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.22■□□□□ 0.03
PFDN1O60925 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.22■□□□□ 0.03
PFDN1O60925 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PFDN1O60925 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PFDN1O60925 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.22■□□□□ 0.03
PFDN1O60925 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.22■□□□□ 0.03
PFDN1O60925 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.21■□□□□ 0.03
PFDN1O60925 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.21■□□□□ 0.03
PFDN1O60925 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PFDN1O60925 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PFDN1O60925 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PFDN1O60925 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.21■□□□□ 0.03
PFDN1O60925 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.21■□□□□ 0.03
PFDN1O60925 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.21■□□□□ 0.03
PFDN1O60925 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 AL603832.2-201ENST00000566195 2125 ntBASIC15.21■□□□□ 0.03
PFDN1O60925 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
PFDN1O60925 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PFDN1O60925 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.21■□□□□ 0.03
PFDN1O60925 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PFDN1O60925 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PFDN1O60925 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PFDN1O60925 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms