Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SYNGR3O43761 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNGR3O43761 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SYNGR3O43761 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNGR3O43761 TUBB8P12-201ENST00000308911 1335 ntBASIC14.89□□□□□ -0.03
SYNGR3O43761 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.89□□□□□ -0.03
SYNGR3O43761 TUBB7P-202ENST00000428444 1305 ntBASIC14.89□□□□□ -0.03
SYNGR3O43761 TUBB8P7-204ENST00000567960 1332 ntBASIC14.89□□□□□ -0.03
SYNGR3O43761 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNGR3O43761 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNGR3O43761 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNGR3O43761 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SYNGR3O43761 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.88□□□□□ -0.03
SYNGR3O43761 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.88□□□□□ -0.03
SYNGR3O43761 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.88□□□□□ -0.03
SYNGR3O43761 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.88□□□□□ -0.03
SYNGR3O43761 TERC-201ENST00000602385 541 ntBASIC14.88□□□□□ -0.03
SYNGR3O43761 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
SYNGR3O43761 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.88□□□□□ -0.03
SYNGR3O43761 MIR1199-201ENST00000621445 119 ntBASIC14.88□□□□□ -0.03
SYNGR3O43761 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SYNGR3O43761 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SYNGR3O43761 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.88□□□□□ -0.03
SYNGR3O43761 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SYNGR3O43761 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SYNGR3O43761 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SYNGR3O43761 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNGR3O43761 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNGR3O43761 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNGR3O43761 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNGR3O43761 AC092910.1-201ENST00000482027 1129 ntBASIC14.87□□□□□ -0.03
SYNGR3O43761 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNGR3O43761 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNGR3O43761 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.87□□□□□ -0.03
SYNGR3O43761 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNGR3O43761 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
SYNGR3O43761 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.87□□□□□ -0.03
SYNGR3O43761 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 PKD1P1-201ENST00000458669 6805 ntBASIC14.87□□□□□ -0.03
SYNGR3O43761 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SYNGR3O43761 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNGR3O43761 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.87□□□□□ -0.03
SYNGR3O43761 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
SYNGR3O43761 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SYNGR3O43761 PCDHB17P-201ENST00000539533 2393 ntBASIC14.87□□□□□ -0.03
SYNGR3O43761 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SYNGR3O43761 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNGR3O43761 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNGR3O43761 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.86□□□□□ -0.03
SYNGR3O43761 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNGR3O43761 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SYNGR3O43761 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNGR3O43761 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.86□□□□□ -0.03
SYNGR3O43761 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SYNGR3O43761 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SYNGR3O43761 AC078925.2-201ENST00000624013 1973 ntBASIC14.86□□□□□ -0.03
SYNGR3O43761 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms