Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MSI1O43347 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.68■□□□□ 0.42
MSI1O43347 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.68■□□□□ 0.42
MSI1O43347 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.68■□□□□ 0.42
MSI1O43347 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.68■□□□□ 0.42
MSI1O43347 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.68■□□□□ 0.42
MSI1O43347 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MSI1O43347 AC096734.2-201ENST00000562054 433 ntBASIC17.68■□□□□ 0.42
MSI1O43347 AC040169.1-201ENST00000565382 521 ntBASIC17.68■□□□□ 0.42
MSI1O43347 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.68■□□□□ 0.42
MSI1O43347 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.68■□□□□ 0.42
MSI1O43347 REXO1L3P-201ENST00000622202 1288 ntBASIC17.68■□□□□ 0.42
MSI1O43347 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MSI1O43347 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MSI1O43347 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MSI1O43347 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.68■□□□□ 0.42
MSI1O43347 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.68■□□□□ 0.42
MSI1O43347 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
MSI1O43347 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.67■□□□□ 0.42
MSI1O43347 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MSI1O43347 AP001094.4-201ENST00000579008 2176 ntBASIC17.67■□□□□ 0.42
MSI1O43347 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
MSI1O43347 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.67■□□□□ 0.42
MSI1O43347 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.67■□□□□ 0.42
MSI1O43347 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.67■□□□□ 0.42
MSI1O43347 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 FAM185BP-201ENST00000443595 716 ntBASIC17.67■□□□□ 0.42
MSI1O43347 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.67■□□□□ 0.42
MSI1O43347 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 AC092865.5-201ENST00000545435 363 ntBASIC17.67■□□□□ 0.42
MSI1O43347 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.67■□□□□ 0.42
MSI1O43347 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 AC004877.2-201ENST00000623941 599 ntBASIC17.67■□□□□ 0.42
MSI1O43347 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.67■□□□□ 0.42
MSI1O43347 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 BCAR1-209ENST00000546196 1340 ntBASIC17.67■□□□□ 0.42
MSI1O43347 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.67■□□□□ 0.42
MSI1O43347 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MSI1O43347 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MSI1O43347 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.66■□□□□ 0.42
MSI1O43347 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.66■□□□□ 0.42
MSI1O43347 BX842568.4-201ENST00000421222 227 ntBASIC17.66■□□□□ 0.42
MSI1O43347 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.66■□□□□ 0.42
MSI1O43347 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.66■□□□□ 0.42
MSI1O43347 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.66■□□□□ 0.42
MSI1O43347 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.66■□□□□ 0.42
MSI1O43347 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.66■□□□□ 0.42
MSI1O43347 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.66■□□□□ 0.42
MSI1O43347 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.66■□□□□ 0.42
MSI1O43347 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.66■□□□□ 0.42
MSI1O43347 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
MSI1O43347 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.66■□□□□ 0.42
MSI1O43347 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MSI1O43347 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.66■□□□□ 0.42
MSI1O43347 AC129492.6-201ENST00000611383 1305 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms