Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A1O14983 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A1O14983 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP2A1O14983 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP2A1O14983 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP2A1O14983 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2A1O14983 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2A1O14983 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 NOC2LP1-202ENST00000452600 2235 ntBASIC19.45■□□□□ 0.7
ATP2A1O14983 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL138688.1-201ENST00000624851 1594 ntBASIC19.45■□□□□ 0.7
ATP2A1O14983 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
ATP2A1O14983 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL135744.1-201ENST00000565098 629 ntBASIC19.45■□□□□ 0.7
ATP2A1O14983 MIR3909-201ENST00000579518 119 ntBASIC19.45■□□□□ 0.7
ATP2A1O14983 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A1O14983 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 AC093525.9-201ENST00000624961 1746 ntBASIC19.45■□□□□ 0.7
ATP2A1O14983 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A1O14983 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A1O14983 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A1O14983 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 AC116353.5-201ENST00000638148 1699 ntBASIC19.44■□□□□ 0.7
ATP2A1O14983 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 AL592309.1-201ENST00000443127 649 ntBASIC19.44■□□□□ 0.7
ATP2A1O14983 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A1O14983 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 AL512356.2-201ENST00000546955 174 ntBASIC19.44■□□□□ 0.7
ATP2A1O14983 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.44■□□□□ 0.7
ATP2A1O14983 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.44■□□□□ 0.7
ATP2A1O14983 MIR3197-201ENST00000582241 73 ntBASIC19.44■□□□□ 0.7
ATP2A1O14983 AC084121.4-201ENST00000641598 221 ntBASIC19.44■□□□□ 0.7
ATP2A1O14983 AF228730.8-201ENST00000642140 221 ntBASIC19.44■□□□□ 0.7
ATP2A1O14983 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A1O14983 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ATP2A1O14983 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A1O14983 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A1O14983 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP2A1O14983 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP2A1O14983 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2A1O14983 SLC22A20-204ENST00000530038 1673 ntBASIC19.43■□□□□ 0.7
ATP2A1O14983 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2A1O14983 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATP2A1O14983 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATP2A1O14983 AC026471.1-201ENST00000564629 3026 ntBASIC19.43■□□□□ 0.7
ATP2A1O14983 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2A1O14983 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2A1O14983 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A1O14983 LINC01225-203ENST00000563550 1244 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms