Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN4O14493 MRPL20P1-201ENST00000400819 433 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN4O14493 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN4O14493 AC108751.1-201ENST00000490852 363 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 UNC93B6-202ENST00000528242 690 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN4O14493 AC124947.2-201ENST00000547118 1133 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN4O14493 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN4O14493 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.08■□□□□ 0.16
CLDN4O14493 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN4O14493 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN4O14493 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN4O14493 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN4O14493 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN4O14493 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN4O14493 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN4O14493 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLDN4O14493 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN4O14493 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN4O14493 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN4O14493 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN4O14493 PAWRP1-201ENST00000451083 565 ntBASIC16.07■□□□□ 0.16
CLDN4O14493 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN4O14493 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN4O14493 Z83851.2-201ENST00000609564 659 ntBASIC16.07■□□□□ 0.16
CLDN4O14493 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN4O14493 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLDN4O14493 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.07■□□□□ 0.16
CLDN4O14493 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN4O14493 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLDN4O14493 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN4O14493 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 AC108860.2-201ENST00000562760 2183 ntBASIC16.06■□□□□ 0.16
CLDN4O14493 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN4O14493 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 AL021920.2-201ENST00000624828 1351 ntBASIC16.06■□□□□ 0.16
CLDN4O14493 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLDN4O14493 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 PRSS29P-201ENST00000440800 595 ntBASIC16.06■□□□□ 0.16
CLDN4O14493 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
CLDN4O14493 AC145285.3-201ENST00000564603 959 ntBASIC16.06■□□□□ 0.16
CLDN4O14493 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN4O14493 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN4O14493 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN4O14493 AC011270.2-201ENST00000624293 2550 ntBASIC16.06■□□□□ 0.16
CLDN4O14493 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN4O14493 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN4O14493 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN4O14493 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN4O14493 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 AC104109.2-201ENST00000602919 1418 ntBASIC16.05■□□□□ 0.16
CLDN4O14493 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms