Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AC009947.2-201ENST00000444014 672 ntBASIC12.03□□□□□ -0.48
LINC01546A6NGU7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AC122714.2-201ENST00000502787 707 ntBASIC12.03□□□□□ -0.48
LINC01546A6NGU7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 RNA5SP413-201ENST00000516373 109 ntBASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AC073648.6-201ENST00000641589 218 ntBASIC12.03□□□□□ -0.48
LINC01546A6NGU7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 AC097637.2-201ENST00000624096 1997 ntBASIC12.03□□□□□ -0.48
LINC01546A6NGU7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01546A6NGU7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01546A6NGU7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms