Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 FRMD8P1-201ENST00000440433 1524 ntBASIC20.07■□□□□ 0.8
PTPDC1A2A3K4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 KRT18P27-201ENST00000427733 1299 ntBASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 AL589182.2-201ENST00000619332 1049 ntBASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 AC005593.1-201ENST00000624894 515 ntBASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPDC1A2A3K4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 GPR89P-201ENST00000407924 1495 ntBASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AC073621.1-201ENST00000392730 636 ntBASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AC136632.2-201ENST00000512891 861 ntBASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 FAM197Y3-203ENST00000618346 717 ntBASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPDC1A2A3K4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 ACTG1P4-201ENST00000425123 1122 ntBASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 FLJ38576-201ENST00000623820 2459 ntBASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 AC097637.2-201ENST00000624096 1997 ntBASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms