Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3DA0A087WVF3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3DA0A087WVF3 AC007613.1-201ENST00000572811 2597 ntBASIC16.93■□□□□ 0.3
TBC1D3DA0A087WVF3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3DA0A087WVF3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TBC1D3DA0A087WVF3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TBC1D3DA0A087WVF3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 SPDYE11-202ENST00000450699 704 ntBASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 CYMP-203ENST00000474680 1263 ntBASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 SPDYE9P-201ENST00000570642 692 ntBASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 SPDYE10P-202ENST00000612005 668 ntBASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 SPDYE8P-202ENST00000612377 668 ntBASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 AC106028.4-201ENST00000614509 607 ntBASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TBC1D3DA0A087WVF3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 GNAS-203ENST00000306120 1878 ntBASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 HMGA1P7-201ENST00000406908 502 ntBASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 AL355306.1-201ENST00000415580 579 ntBASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 AC093028.1-201ENST00000622998 982 ntBASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TBC1D3DA0A087WVF3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.9■□□□□ 0.3
TBC1D3DA0A087WVF3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms