Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 AC132938.5-201ENST00000624980 1813 ntBASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.92□□□□□ -0.34
HLA-DRB4X5D2U9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AC103702.1-201ENST00000548801 2630 ntBASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 AP000867.4-201ENST00000641616 219 ntBASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HLA-DRB4X5D2U9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms