Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 AC116353.5-201ENST00000638148 1699 ntBASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PPARGC1AQ9UBK2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 CROCCP2-202ENST00000412962 2773 ntBASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 RNA5SP419-201ENST00000515908 135 ntBASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AC006557.2-201ENST00000592985 1240 ntBASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AL139424.1-201ENST00000607572 797 ntBASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 FER1L4-210ENST00000615531 5998 ntBASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PPARGC1AQ9UBK2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AL031284.1-201ENST00000419297 478 ntBASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AC026396.1-201ENST00000419388 421 ntBASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 KRT18P27-201ENST00000427733 1299 ntBASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 AC008735.5-201ENST00000623544 497 ntBASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 FAM215A-202ENST00000632077 792 ntBASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.81■□□□□ 0.44
PPARGC1AQ9UBK2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.8■□□□□ 0.44
PPARGC1AQ9UBK2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms