Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 AP006288.1-201ENST00000446065 395 ntBASIC15.66■□□□□ 0.1
LRFN1Q9P244 CEND1P1-201ENST00000451006 455 ntBASIC15.66■□□□□ 0.1
LRFN1Q9P244 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 SNHG9-202ENST00000564014 471 ntBASIC15.66■□□□□ 0.1
LRFN1Q9P244 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 AL596442.2-201ENST00000610240 980 ntBASIC15.66■□□□□ 0.1
LRFN1Q9P244 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.66■□□□□ 0.1
LRFN1Q9P244 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.66■□□□□ 0.1
LRFN1Q9P244 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRFN1Q9P244 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 PKD1P5-201ENST00000532415 10291 ntBASIC15.65■□□□□ 0.1
LRFN1Q9P244 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 ELL2P1-201ENST00000413990 1906 ntBASIC15.65■□□□□ 0.1
LRFN1Q9P244 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 FAM58CP-201ENST00000435741 640 ntBASIC15.65■□□□□ 0.1
LRFN1Q9P244 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 ACTL9-202ENST00000612068 1252 ntBASIC15.65■□□□□ 0.1
LRFN1Q9P244 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 GNAS-203ENST00000306120 1878 ntBASIC15.65■□□□□ 0.1
LRFN1Q9P244 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
LRFN1Q9P244 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRFN1Q9P244 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRFN1Q9P244 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.64■□□□□ 0.09
LRFN1Q9P244 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms