Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GCNT4Q9P109 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 AC018712.1-201ENST00000455767 687 ntBASIC18.61■□□□□ 0.57
GCNT4Q9P109 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 AP001005.1-201ENST00000571755 1248 ntBASIC18.61■□□□□ 0.57
GCNT4Q9P109 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 BX640515.1-201ENST00000617215 977 ntBASIC18.61■□□□□ 0.57
GCNT4Q9P109 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 OR6D1P-203ENST00000641209 4860 ntBASIC18.61■□□□□ 0.57
GCNT4Q9P109 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.61■□□□□ 0.57
GCNT4Q9P109 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.61■□□□□ 0.57
GCNT4Q9P109 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GCNT4Q9P109 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 AL031284.1-201ENST00000419297 478 ntBASIC18.6■□□□□ 0.57
GCNT4Q9P109 AF186996.4-201ENST00000467186 377 ntBASIC18.6■□□□□ 0.57
GCNT4Q9P109 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 FLJ38576-201ENST00000623820 2459 ntBASIC18.6■□□□□ 0.57
GCNT4Q9P109 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.6■□□□□ 0.57
GCNT4Q9P109 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GCNT4Q9P109 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 RNF216P1-203ENST00000404404 2427 ntBASIC18.59■□□□□ 0.57
GCNT4Q9P109 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 LINC00982-205ENST00000420957 435 ntBASIC18.59■□□□□ 0.57
GCNT4Q9P109 BX005266.1-201ENST00000473402 457 ntBASIC18.59■□□□□ 0.57
GCNT4Q9P109 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 RNPS1P1-201ENST00000507437 918 ntBASIC18.59■□□□□ 0.57
GCNT4Q9P109 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GCNT4Q9P109 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.59■□□□□ 0.57
GCNT4Q9P109 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms