Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 RNA5SP415-201ENST00000517246 115 ntBASIC18.19■□□□□ 0.5
CISHQ9NSE2 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 AL021920.2-201ENST00000624828 1351 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 AC009947.1-201ENST00000444350 727 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 AC108751.1-201ENST00000490852 363 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 AC004790.2-201ENST00000623588 572 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 PCDHB17P-201ENST00000539533 2393 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 TUBB8P12-201ENST00000308911 1335 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 IL9RP2-201ENST00000423948 1312 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 TUBB7P-202ENST00000428444 1305 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 TUBB8P7-204ENST00000567960 1332 ntBASIC18.18■□□□□ 0.5
CISHQ9NSE2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CISHQ9NSE2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CISHQ9NSE2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CISHQ9NSE2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CISHQ9NSE2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 MRPL20P1-201ENST00000400819 433 ntBASIC18.16■□□□□ 0.5
CISHQ9NSE2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 AL590627.1-203ENST00000421194 1026 ntBASIC18.16■□□□□ 0.5
CISHQ9NSE2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 OR7E47P-204ENST00000575924 449 ntBASIC18.16■□□□□ 0.5
CISHQ9NSE2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 REXO1L3P-201ENST00000622202 1288 ntBASIC18.16■□□□□ 0.5
CISHQ9NSE2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CISHQ9NSE2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms