Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.16■□□□□ 0.18
PRDM9Q9NQV7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 RPL13AP23-201ENST00000480739 586 ntBASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 RNA5SP415-201ENST00000517246 115 ntBASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 AC008667.4-201ENST00000607370 168 ntBASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRDM9Q9NQV7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PRDM9Q9NQV7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AL022342.1-201ENST00000400363 863 ntBASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 UNC93B6-202ENST00000528242 690 ntBASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 TERC-201ENST00000602385 541 ntBASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRDM9Q9NQV7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 IGHV3-65-201ENST00000523210 341 ntBASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.13■□□□□ 0.17
PRDM9Q9NQV7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms