Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 MIR574-201ENST00000385209 96 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 MIR940-201ENST00000401276 94 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 MED15P5-201ENST00000423150 992 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 AC007967.2-201ENST00000432613 625 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 PRSS29P-201ENST00000440800 595 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 KRT18P58-201ENST00000527480 1120 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 AC027601.4-201ENST00000611259 610 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 OR6D1P-203ENST00000641209 4860 ntBASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP13A1Q9HD20 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AC087163.2-201ENST00000457299 853 ntBASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AC140113.2-201ENST00000604370 208 ntBASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AC010654.1-201ENST00000615722 808 ntBASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP13A1Q9HD20 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 VN2R19P-201ENST00000442399 1052 ntBASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 AL591424.1-201ENST00000442569 1213 ntBASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 POLD2P1-201ENST00000511220 997 ntBASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 AL671883.3-201ENST00000603274 991 ntBASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATP13A1Q9HD20 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP13A1Q9HD20 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms