Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 KRT18P1-202ENST00000452408 1331 ntBASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRDL1Q9BU40 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 TSSC2-201ENST00000450217 709 ntBASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 KRT18P35-201ENST00000510488 1269 ntBASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRDL1Q9BU40 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRDL1Q9BU40 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms